| 1 |
9:00 - 12:00 |
3:00 |
1 |
Setup - Intro to Precision Medicine |
| |
12:00 - 1:00 |
1:00 |
|
LUNCH |
| |
1:00 - 5:00 |
4:00 |
2 |
Inputs - References, Annotations and Raw Data |
| 2 |
9:00 - 12:00 |
3:00 |
3 |
Align - Alignment Algorithms, Visualization, and QC |
| |
12:00 - 1:00 |
1:00 |
|
LUNCH |
| |
1:00 - 5:00 |
4:00 |
4 |
Germline - Germline WGS and Exome Variant Analysis |
| 3 |
9:00 - 12:00 |
3:00 |
5 |
Somatic - Somatic WGS and Exome Variant Analysis |
| |
12:00 - 1:00 |
1:00 |
|
LUNCH |
| |
1:00 - 5:00 |
4:00 |
6 |
RNAseq - RNAseq Expression, Differential Expression, and Fusion Analysis |
| 4 |
9:00 - 12:00 |
3:00 |
7 |
Clinical - Clinical Interpretation of Germline and Somatic Variants |
| |
12:00 - 1:00 |
1:00 |
|
LUNCH |
| |
1:00 - 5:00 |
4:00 |
8 |
Immune - Immunogenomic Analysis and Personalized Vaccines |
| 5 |
9:00 - 12:00 |
3:00 |
9 |
CWL - Intro to the Common Workflow Language |
| |
12:00 - 1:00 |
1:00 |
|
LUNCH |
| |
1:00 - 5:00 |
4:00 |
10 |
Additional Resources, Open Forum, Work on your own Data |
